SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30611

Signal sequence   MCHRSHGRSLRPPSPLLLLLPLLLQSPWAAGAAEKHNSA

Length  39

Organism  Rattus norvegicus (Rat)

UniProt ID  Q5U2V4,

Motif  1..39



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Lysosome

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30611.cif

Structure  SPKB30611.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4226.97664

Aliphatic index  102.8205128

Isoelectric point  11.37968644

Charge (pH=7)   3.210207011

Topological polar surface area  1663.35

Aromaticity  0.025641026

Average rotatable bonds  3.358974359

Number of hydrogen bond donors  58

Number of hydrogen bond acceptors  57

X logP energy  -15.68079

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.