SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30610

Signal sequence   MPLLLHPAWPLLLGATLTFRALRRVLC

Length  27

Organism  Rattus norvegicus (Rat)

UniProt ID  Q5U2T1,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30610.cif

Structure  SPKB30610.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3072.85584

Aliphatic index  151.8518519

Isoelectric point  12.19926532

Charge (pH=7)   3.02690874

Topological polar surface area  1064.18

Aromaticity  0.074074074

Average rotatable bonds  3.444444444

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  36

X logP energy  -2.54949

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.