SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30425

Signal sequence   MTMAISSALPSPLLLAASLLLLIVQAQG

Length  28

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q5N9X2,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30425.cif

Structure  SPKB30425.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2823.48564

Aliphatic index  167.5

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  1018.77

Aromaticity  0

Average rotatable bonds  3.25

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  38

X logP energy  -7.2646

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.