SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30422

Signal sequence   MAFPAPSSSSPRRRGRGLAYLLVSVLLLASRVPGA

Length  35

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q5N808,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30422.cif

Structure  SPKB30422.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3654.33784

Aliphatic index  106

Isoelectric point  12.6770776

Charge (pH=7)   4.997117329

Topological polar surface area  1468.67

Aromaticity  0.057142857

Average rotatable bonds  3.228571429

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  49

X logP energy  -15.64115

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.