SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30403

Signal sequence   MAHRWINDLTPADITPRGAWMNRRQVMAGMAGAGLAAFAGSAQA

Length  44

Organism  Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)

UniProt ID  Q5LNE0,

Motif  1..44



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30403.cif

Structure  SPKB30403.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4641.34424

Aliphatic index  67.04545455

Isoelectric point  12.02309897

Charge (pH=7)   2.089773113

Topological polar surface area  1912.55

Aromaticity  0.068181818

Average rotatable bonds  3.340909091

Number of hydrogen bond donors  67

Number of hydrogen bond acceptors  63

X logP energy  -20.81952

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.