SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30316

Signal sequence   MSGARTAHALVFLLGCSALALGVCS

Length  25

Organism  Rattus norvegicus (Rat)

UniProt ID  Q5FVF9,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30316.cif

Structure  SPKB30316.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2448.94224

Aliphatic index  121.2

Isoelectric point  8.242951845

Charge (pH=7)   0.964940647

Topological polar surface area  933.22

Aromaticity  0.04

Average rotatable bonds  3.12

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -9.98813

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.