SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30271

Signal sequence   MACRSHIQPSDLACTMQLALAWIILGACG

Length  29

Organism  Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)

UniProt ID  Q5DRQ5,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30271.cif

Structure  SPKB30271.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3074.70044

Aliphatic index  111.3793103

Isoelectric point  7.179926964

Charge (pH=7)   -0.096587585

Topological polar surface area  1159.87

Aromaticity  0.034482759

Average rotatable bonds  3.379310345

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  43

X logP energy  -10.21633

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.