SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29965

Signal sequence   MNKTNQLINICILVTLFLIGSSSA

Length  24

Organism  Dictyostelium discoideum (Social amoeba)

UniProt ID  Q54BN0,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Cytoplasmic vesicle

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29965.cif

Structure  SPKB29965.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2594.12274

Aliphatic index  146.25

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  1032.15

Aromaticity  0.041666667

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  37

X logP energy  -10.0904

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.