SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29953

Signal sequence   MARDKQSALIVAAFVLLCSGCLCGVADG

Length  28

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q53RJ5,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29953.cif

Structure  SPKB29953.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2812.37124

Aliphatic index  118.5714286

Isoelectric point  6.108850184

Charge (pH=7)   -0.187345225

Topological polar surface area  1095.09

Aromaticity  0.035714286

Average rotatable bonds  3.321428571

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  40

X logP energy  -10.94293

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.