SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29914

Signal sequence   MQTPKLIRPTLLSMAILSSMAWATGASA

Length  28

Organism  Pseudomonas syringae pv. syringae (strain B728a)

UniProt ID  Q4ZXL0,

Motif  1..28



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29914.cif

Structure  SPKB29914.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2947.56234

Aliphatic index  101.4285714

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  1119.85

Aromaticity  0.035714286

Average rotatable bonds  3.357142857

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  42

X logP energy  -10.73953

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.