SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29913

Signal sequence   MFFKPDFRPRCAKWLIATGLFLMLGACVE

Length  29

Organism  Pseudomonas syringae pv. syringae (strain B728a)

UniProt ID  Q4ZX03,

Motif  1..29



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29913.cif

Structure  SPKB29913.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3362.13324

Aliphatic index  87.5862069

Isoelectric point  8.821434072

Charge (pH=7)   1.875659784

Topological polar surface area  1147

Aromaticity  0.172413793

Average rotatable bonds  3.655172414

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  41

X logP energy  -3.24046

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.