SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29910

Signal sequence   MASPALRHFLPRFGAAAAAASFLSLA

Length  26

Organism  Pseudomonas syringae pv. syringae (strain B728a)

UniProt ID  Q4ZPM1,

Motif  1..26



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29910.cif

Structure  SPKB29910.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2645.12044

Aliphatic index  94.61538462

Isoelectric point  12.50011018

Charge (pH=7)   2.088886768

Topological polar surface area  986.41

Aromaticity  0.115384615

Average rotatable bonds  3.038461538

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  34

X logP energy  -8.52396

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.