SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29664

Signal sequence   MKRTMIVVTTLLLGAGAVMA

Length  20

Organism  Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)

UniProt ID  Q45234,

Motif  1..20



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29664.cif

Structure  SPKB29664.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2076.64554

Aliphatic index  136.5

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  764.83

Aromaticity  0

Average rotatable bonds  3.5

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  29

X logP energy  -5.12163

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.