SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29615

Signal sequence   MSRLSLVLILVAGLFA

Length  16

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  Q40143,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Vacuole

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29615.cif

Structure  SPKB29615.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1703.15944

Aliphatic index  195

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  602.18

Aromaticity  0.0625

Average rotatable bonds  3.5

Number of hydrogen bond donors  22

Number of hydrogen bond acceptors  21

X logP energy  -1.82623

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.