SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29611

Signal sequence   MYGIEYTTVLTFLISFILLNYILKSLTRMMDFVIYRFLFVIVVLSPLLKA

Length  50

Organism  Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14]) (RV-A) (Rotavirus A (isolate B4106))

UniProt ID  Q3ZK60,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29611.cif

Structure  SPKB29611.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5924.32694

Aliphatic index  155.8

Isoelectric point  9.60406131

Charge (pH=7)   1.996207559

Topological polar surface area  1996.49

Aromaticity  0.18

Average rotatable bonds  3.84

Number of hydrogen bond donors  72

Number of hydrogen bond acceptors  72

X logP energy  -1.90586

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.