SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29553

Signal sequence   MKFFQRPERRLKQWGLALLLAASALLPARA

Length  30

Organism  Thiobacillus denitrificans (strain ATCC 25259 / T1)

UniProt ID  Q3SGF9,

Motif  1..30



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29553.cif

Structure  SPKB29553.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3453.20144

Aliphatic index  111

Isoelectric point  12.51642737

Charge (pH=7)   4.999156109

Topological polar surface area  1348.78

Aromaticity  0.1

Average rotatable bonds  3.8

Number of hydrogen bond donors  48

Number of hydrogen bond acceptors  42

X logP energy  -7.79492

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.