SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29498

Signal sequence   MSFLQALSIFLLLLLYVVVGSA

Length  22

Organism  Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)

UniProt ID  Q39799,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29498.cif

Structure  SPKB29498.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2397.98484

Aliphatic index  190.4545455

Isoelectric point  6.093198033

Charge (pH=7)   -0.002866115

Topological polar surface area  798.43

Aromaticity  0.136363636

Average rotatable bonds  3.5

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  29

X logP energy  -0.9837

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.