SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29497

Signal sequence   MAPHLNIVPSMFVLLLLFISASKVQP

Length  26

Organism  Gossypium barbadense (Sea Island cotton) (Hibiscus barbadensis)

UniProt ID  Q39766,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29497.cif

Structure  SPKB29497.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2866.55924

Aliphatic index  146.1538462

Isoelectric point  9.702001779

Charge (pH=7)   1.088598356

Topological polar surface area  966.02

Aromaticity  0.076923077

Average rotatable bonds  3.423076923

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  36

X logP energy  -3.4284

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.