SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29180

Signal sequence   MLRISSSSSMALKFSQILFIVLWLSLFFLLLHHLY

Length  35

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q29PU4,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29180.cif

Structure  SPKB29180.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4156.10154

Aliphatic index  156

Isoelectric point  10.45513896

Charge (pH=7)   2.178653722

Topological polar surface area  1418.72

Aromaticity  0.171428571

Average rotatable bonds  3.885714286

Number of hydrogen bond donors  52

Number of hydrogen bond acceptors  51

X logP energy  -3.15853

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.