SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29152

Signal sequence   MDPVQLLSFLLALLLPLGTALD

Length  22

Organism  Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)

UniProt ID  Q28F39,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29152.cif

Structure  SPKB29152.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2353.88574

Aliphatic index  181.8181818

Isoelectric point  3.4918815

Charge (pH=7)   -2.001122732

Topological polar surface area  814.99

Aromaticity  0.045454545

Average rotatable bonds  3.363636364

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  29

X logP energy  -2.0826

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.