SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29149

Signal sequence   MDTRRLLLCLCLWVACVVS

Length  19

Organism  Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)

UniProt ID  Q28BT4,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29149.cif

Structure  SPKB29149.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2194.75794

Aliphatic index  153.6842105

Isoelectric point  8.04681161

Charge (pH=7)   0.812500013

Topological polar surface area  804.47

Aromaticity  0.052631579

Average rotatable bonds  3.684210526

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  29

X logP energy  -4.01606

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.