SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB29033

Signal sequence   MSVFAGYAACTLGAVSMLLCVSLVPQVYQ

Length  29

Organism  Caenorhabditis elegans

UniProt ID  Q20778,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB29033.cif

Structure  SPKB29033.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3022.64404

Aliphatic index  117.5862069

Isoelectric point  5.822115236

Charge (pH=7)   -0.127665961

Topological polar surface area  1076.89

Aromaticity  0.103448276

Average rotatable bonds  3.206896552

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  42

X logP energy  -8.3205

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.