SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28944

Signal sequence   MASGYDFGWIPVLLSLFTLTDA

Length  22

Organism  Danio rerio (Zebrafish) (Brachydanio rerio)

UniProt ID  Q1LUM3,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28944.cif

Structure  SPKB28944.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2417.80174

Aliphatic index  110.9090909

Isoelectric point  3.491881337

Charge (pH=7)   -2.001973147

Topological polar surface area  857.17

Aromaticity  0.181818182

Average rotatable bonds  3.272727273

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  31

X logP energy  -4.1192

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.