SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28858

Signal sequence   MRCVVLFMVSCLLIVLLINHFEEVEA

Length  26

Organism  Arabidopsis halleri subsp. gemmifera (Arabis gemmifera)

UniProt ID  Q19MC2,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28858.cif

Structure  SPKB28858.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3021.74594

Aliphatic index  164.6153846

Isoelectric point  4.47376154

Charge (pH=7)   -2.029733985

Topological polar surface area  1056.62

Aromaticity  0.076923077

Average rotatable bonds  3.846153846

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  38

X logP energy  -2.31673

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.