SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28856

Signal sequence   MLGNITPVSFFKTWVLKKTDVHVMISAREVFPCFIFRVFLLFQVFSRVHTLTNHANFEFEKSLSSCDKPCYNGVCLNKACVCSKGWYGSQCDHCFGRIRISDNASYISDGPLDYSPSAKCTWLIEPENSATPLKIRINSFFTECGWDYLYIYDGDSVYGKQLAALCGEQPSQEFTAASGKALVHFFSDLAINLNGFNVSYESNRCAYNCSNHGSCLNGKCDCEDGYKGLNCEYQVCQLSGKSTESPCHEGQCVDGRCECLSARVHGETCQMPVSSSVWDLIHPTNNAPTGKASHASIAIDDVVWSIGGEFFDGSSDPNNIDVYNVTSRIWSKVEVSGDMPKPRFDHTVVKYKNKLYMFGGVTKTQVRHQTTQAATNELWIFDMGSKKWAQQIHKNETIIAAPFAVAGHSAHVIRSEMFVIFGYNPLFGFMHHVQIYNFETEEWTVANTSDHVYGRFKHSAVEYTTPTGATAILVYGGSMWNNTITDSLMQFDTSTKKWSNLPQSGVQLYLHAAAYLNGLMVVVGGRGSNVTAGSKSECFSNMVQSYDVACKQWSNMSTAPVDLKRFGHSVHVIGQKLYALGGFNGKMKSDVWTLSPAKCSSATRPDECRLITDGTKCVFVDSSCVPFDPTVSYKSSFASMIKSSTPKSFDECTNTPLRLALKTCEEQTDCVSCASKSGCGWCSSGEQCLPNEQECVDGPGMLTSWEKCPQRNSVATMRPCNMENNCGSCRISPHCTWYPIDKASPCVSKEDLSPAFFLVHSRRKGKNRDPNQYQAADMSRVPRAAAFNSLAVVYEYETKSVLADRNKFLSPSHFPSFFRNATECPMPCAQRNNCSDCTDLEQCMWCPSTNRCINLEAYTLSFAYGQCHSWVTSGSGSVINRVCQAESVVCEEHKTCGECQRDPGCGWLADDSKTGLGLCIRGTSTGPLEPKPENSTWYFIDCPACQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTTGAHCERCAPGFYGDARNGGVCSPCDCHHQADMCDPVSGQCFCKTKGVTGDRCDKCEAKYVGNPRNGTPCFYELAVDFIFTFKLRSDDKDNHTSEIYLYSVPYKKDTDVTFQISCESPKGNALVALNMTSSYVNGLADKSQAMMVDTICDSKGFRRVYVASDKGYPFGPDSNTTFFVRVYNFNTPVQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWMIKVRIEAYRRNQRRIDEIEHMASRPFASTKMELSMLSQFSSAGGPTPLSIEPCSNYRAGVFTLAVRLPTGGKAVTPSGTSGLAVASSLCLLTPQQVGVLQAQDNGESNSGRKSNFRNLLRLTIRQRPNNND

Length  100

Organism  Caenorhabditis elegans

UniProt ID  Q19981,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28856.cif

Structure  SPKB28856.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  146792.1017

Aliphatic index  64.53724605

Isoelectric point  7.192518742

Charge (pH=7)   -3.73205171

Topological polar surface area  59738.51

Aromaticity  0.102332581

Average rotatable bonds  0.752445448

Number of hydrogen bond donors  1000

Number of hydrogen bond acceptors  1000

X logP energy  -849.60455

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.