SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28843

Signal sequence   MRRNDLLNNKITIFLSSLSLFVIIIPIYA

Length  29

Organism  Caenorhabditis elegans

UniProt ID  Q18439,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28843.cif

Structure  SPKB28843.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3379.10734

Aliphatic index  161.3793103

Isoelectric point  10.44645567

Charge (pH=7)   1.997278713

Topological polar surface area  1286.87

Aromaticity  0.103448276

Average rotatable bonds  3.862068966

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  43

X logP energy  -7.03716

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.