SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28797

Signal sequence   MTNRTPRISAIRSAALAALLAGLGMGAAQA

Length  30

Organism  Polaromonas sp. (strain JS666 / ATCC BAA-500)

UniProt ID  Q128M1,

Motif  1..30



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  4MHF,

Predicted Structure ID  SPKB28797.cif

Structure  SPKB28797.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2954.50204

Aliphatic index  108

Isoelectric point  12.801071

Charge (pH=7)   2.997974365

Topological polar surface area  1251.23

Aromaticity  0

Average rotatable bonds  3.233333333

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  42

X logP energy  -15.50329

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.