SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28751

Signal sequence   MSSSSSMECTGNMSAAPLLVLTVAVLAVLASTCAA

Length  35

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q10BU2,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28751.cif

Structure  SPKB28751.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3388.00024

Aliphatic index  108.8571429

Isoelectric point  3.849941048

Charge (pH=7)   -1.12419001

Topological polar surface area  1326.62

Aromaticity  0

Average rotatable bonds  3.085714286

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  53

X logP energy  -18.0395

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.