SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28732

Signal sequence   MSHFLTFCFLSLLLLLHGANA

Length  21

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q0WR59,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28732.cif

Structure  SPKB28732.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2348.84924

Aliphatic index  139.5238095

Isoelectric point  7.523974965

Charge (pH=7)   0.117827765

Topological polar surface area  806.46

Aromaticity  0.142857143

Average rotatable bonds  3.523809524

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -3.3284

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.