SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28675

Signal sequence   MQYKDENGVNEPSRRRLLKGIGALAGSCPVAHA

Length  33

Organism  Shigella flexneri serotype 5b (strain 8401)

UniProt ID  Q0T616,

Motif  1..33



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28675.cif

Structure  SPKB28675.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3539.04774

Aliphatic index  76.96969697

Isoelectric point  9.40461306

Charge (pH=7)   2.029464988

Topological polar surface area  1545.22

Aromaticity  0.03030303

Average rotatable bonds  3.575757576

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  51

X logP energy  -18.12409

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.