SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28669

Signal sequence   MVPSTFSRLKAARCLPVVLAALIFAG

Length  26

Organism  Shigella flexneri serotype 5b (strain 8401)

UniProt ID  Q0T0D4,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28669.cif

Structure  SPKB28669.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2732.38454

Aliphatic index  127.6923077

Isoelectric point  11.48119255

Charge (pH=7)   2.935707927

Topological polar surface area  983.75

Aromaticity  0.076923077

Average rotatable bonds  3.269230769

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -6.35066

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.