SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28650

Signal sequence   MAVGNGLILYHILGLASCIALVYFSLG

Length  27

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q0JJD4,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28650.cif

Structure  SPKB28650.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2809.42034

Aliphatic index  162.5925926

Isoelectric point  7.352020695

Charge (pH=7)   0.025217846

Topological polar surface area  972.61

Aromaticity  0.111111111

Average rotatable bonds  3.296296296

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  36

X logP energy  -4.0367

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.