SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28601

Signal sequence   MCGCASGEDAMETRRPLHPLLLFFSPWLLLLLLLVVQGVRS

Length  41

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q0DIT2,

Motif  1..41



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28601.cif

Structure  SPKB28601.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4583.55264

Aliphatic index  130.7317073

Isoelectric point  7.256075471

Charge (pH=7)   -0.031069246

Topological polar surface area  1667.03

Aromaticity  0.073170732

Average rotatable bonds  3.56097561

Number of hydrogen bond donors  60

Number of hydrogen bond acceptors  58

X logP energy  -9.12369

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.