SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28527

Signal sequence   MTHRFPRSRTALAVALMAGFAMSAQA

Length  26

Organism  Burkholderia ambifaria (strain ATCC BAA-244 / DSM 16087 / CCUG 44356 / LMG 19182 / AMMD) (Burkholderia cepacia (strain AMMD))

UniProt ID  Q0B2F6,

Motif  1..26



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  4LN5,

Predicted Structure ID  SPKB28527.cif

Structure  SPKB28527.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2793.31874

Aliphatic index  68.07692308

Isoelectric point  12.80107132

Charge (pH=7)   3.088883456

Topological polar surface area  1120.42

Aromaticity  0.076923077

Average rotatable bonds  3.423076923

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  39

X logP energy  -11.94459

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.