SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28483

Signal sequence   MNHSIKKTYLVFTMLLGFILLAG

Length  23

Organism  Shewanella frigidimarina (strain NCIMB 400)

UniProt ID  Q086E4,

Motif  1..23



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28483.cif

Structure  SPKB28483.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2611.24214

Aliphatic index  135.6521739

Isoelectric point  10.24773591

Charge (pH=7)   2.087452908

Topological polar surface area  908.25

Aromaticity  0.130434783

Average rotatable bonds  3.782608696

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  34

X logP energy  -2.8817

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.