SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28479

Signal sequence   MIKTLFIILLCGILSA

Length  16

Organism  Shewanella frigidimarina (strain NCIMB 400)

UniProt ID  Q085S2,

Motif  1..16



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28479.cif

Structure  SPKB28479.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1749.28654

Aliphatic index  201.25

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  566.3

Aromaticity  0.0625

Average rotatable bonds  3.6875

Number of hydrogen bond donors  21

Number of hydrogen bond acceptors  22

X logP energy  0.1181

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.