SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28471

Signal sequence   MKHSKKIIFALLALAMSNTSMA

Length  22

Organism  Shewanella frigidimarina (strain NCIMB 400)

UniProt ID  Q07YK0,

Motif  1..22



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28471.cif

Structure  SPKB28471.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2406.98874

Aliphatic index  106.8181818

Isoelectric point  11.10308693

Charge (pH=7)   3.088008289

Topological polar surface area  905.17

Aromaticity  0.045454545

Average rotatable bonds  3.818181818

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  35

X logP energy  -7.0229

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.