SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28434

Signal sequence   MKRIKRILAVLTIFALLATINAFTFVSLA

Length  29

Organism  Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Clostridium thermocellum)

UniProt ID  Q06848,

Motif  1..29



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell wall

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28434.cif

Structure  SPKB28434.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3236.05194

Aliphatic index  158.2758621

Isoelectric point  12.53174703

Charge (pH=7)   3.997387609

Topological polar surface area  1177.97

Aromaticity  0.103448276

Average rotatable bonds  3.724137931

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  40

X logP energy  -4.92506

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.