SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28414

Signal sequence   MSCKKSARQSLYVSLCLFYILVFAAA

Length  26

Organism  Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)

UniProt ID  Q06094,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28414.cif

Structure  SPKB28414.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2913.54724

Aliphatic index  112.6923077

Isoelectric point  9.367760438

Charge (pH=7)   2.87174066

Topological polar surface area  1069.23

Aromaticity  0.153846154

Average rotatable bonds  3.653846154

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  40

X logP energy  -7.10893

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.