SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28413

Signal sequence   MHLEVIVQSYKKSKYYFSHTFYLYKFIVVNSPDMLHISRLGLFLGLFAIVMHSVNL

Length  56

Organism  Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)

UniProt ID  Q06093,

Motif  1..56



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28413.cif

Structure  SPKB28413.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  6639.92874

Aliphatic index  116.4285714

Isoelectric point  9.807613342

Charge (pH=7)   3.358406752

Topological polar surface area  2382.36

Aromaticity  0.178571429

Average rotatable bonds  3.857142857

Number of hydrogen bond donors  84

Number of hydrogen bond acceptors  86

X logP energy  -10.11243

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.