SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28398

Signal sequence   MVLCCVFLLFLTGSFA

Length  16

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  Q05540,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28398.cif

Structure  SPKB28398.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1764.23204

Aliphatic index  140

Isoelectric point  5.826007312

Charge (pH=7)   -0.125965132

Topological polar surface area  540.28

Aromaticity  0.1875

Average rotatable bonds  3.375

Number of hydrogen bond donors  21

Number of hydrogen bond acceptors  22

X logP energy  -0.4681

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.