SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28380

Signal sequence   MQWGHCGVKSASCSWTPSLSSLLVWLILPFSLPYC

Length  35

Organism  Porcine reproductive and respiratory syndrome virus (strain Lelystad) (PRRSV)

UniProt ID  Q04566,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28380.cif

Structure  SPKB28380.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3898.62854

Aliphatic index  97.42857143

Isoelectric point  8.056199563

Charge (pH=7)   0.901823794

Topological polar surface area  1353.58

Aromaticity  0.142857143

Average rotatable bonds  3.285714286

Number of hydrogen bond donors  51

Number of hydrogen bond acceptors  52

X logP energy  -9.0898

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.