SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28342

Signal sequence   MVKLAHLLVATFGVLLVLNGCLA

Length  23

Organism  Raphanus sativus (Radish) (Raphanus raphanistrum var. sativus)

UniProt ID  Q02498,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28342.cif

Structure  SPKB28342.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2396.03374

Aliphatic index  182.173913

Isoelectric point  8.552755748

Charge (pH=7)   1.026623641

Topological polar surface area  821.54

Aromaticity  0.043478261

Average rotatable bonds  3.391304348

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -2.3903

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.