SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28282

Signal sequence   MYGIEYTTFLIYLISIILFNYILKSITRMMDYIIYKFLLIVTITSIVVNA

Length  50

Organism  Rotavirus A (isolate RVA/Cow/Japan/KK3/1983/G10P8[11]) (RV-A)

UniProt ID  Q00254,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28282.cif

Structure  SPKB28282.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5946.28404

Aliphatic index  159.8

Isoelectric point  8.864079134

Charge (pH=7)   0.994510042

Topological polar surface area  2047.16

Aromaticity  0.18

Average rotatable bonds  3.88

Number of hydrogen bond donors  74

Number of hydrogen bond acceptors  75

X logP energy  -3.22773

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.