SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28280

Signal sequence   MYGIEYTTTLIFLILFVLLNYILKSITRVMDYILYRFLLFIVIVTPFVNS

Length  50

Organism  Rotavirus A (isolate RVA/Cow/Thailand/A5/1988/G8P6[1]) (RV-A)

UniProt ID  Q00252,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28280.cif

Structure  SPKB28280.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5998.34754

Aliphatic index  161.6

Isoelectric point  8.920263429

Charge (pH=7)   0.995652179

Topological polar surface area  2033.79

Aromaticity  0.2

Average rotatable bonds  3.82

Number of hydrogen bond donors  73

Number of hydrogen bond acceptors  72

X logP energy  -1.54956

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.