SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28104

Signal sequence   MASSYTLMLFLCLSIFLIAS

Length  20

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P82787,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28104.cif

Structure  SPKB28104.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2224.75974

Aliphatic index  146.5

Isoelectric point  5.919503212

Charge (pH=7)   -0.064840831

Topological polar surface area  737.6

Aromaticity  0.15

Average rotatable bonds  3.55

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  30

X logP energy  -2.8083

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.