SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB28084

Signal sequence   MYSGICIYMFLAMLSTSSSG

Length  20

Organism  Trachemys scripta (Red-eared slider turtle) (Pseudemys scripta)

UniProt ID  P80345,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB28084.cif

Structure  SPKB28084.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2162.57674

Aliphatic index  83

Isoelectric point  5.916508434

Charge (pH=7)   -0.065691245

Topological polar surface area  778.06

Aromaticity  0.15

Average rotatable bonds  3.45

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  33

X logP energy  -7.2527

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.