SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27975

Signal sequence   MDLSNRTVVQVVVLALVAQVTLS

Length  23

Organism  Oncorhynchus nerka (Sockeye salmon) (Salmo nerka)

UniProt ID  P69109,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27975.cif

Structure  SPKB27975.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2455.93914

Aliphatic index  164.7826087

Isoelectric point  6.338718596

Charge (pH=7)   -0.001572528

Topological polar surface area  1012.91

Aromaticity  0

Average rotatable bonds  3.52173913

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  34

X logP energy  -9.47623

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.