SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27724

Signal sequence   MSCKKGARQRLYVSLWLFYILVFAAA

Length  26

Organism  Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus)

UniProt ID  P52547,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27724.cif

Structure  SPKB27724.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3035.70464

Aliphatic index  112.6923077

Isoelectric point  10.4535663

Charge (pH=7)   3.933712065

Topological polar surface area  1106.46

Aromaticity  0.192307692

Average rotatable bonds  3.769230769

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  38

X logP energy  -4.40466

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.