SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27723

Signal sequence   MLFRLWVFVLLTPCYS

Length  16

Organism  Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus)

UniProt ID  P52543,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27723.cif

Structure  SPKB27723.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1988.47934

Aliphatic index  133.75

Isoelectric point  8.527213491

Charge (pH=7)   0.935155858

Topological polar surface area  629.41

Aromaticity  0.25

Average rotatable bonds  3.625

Number of hydrogen bond donors  24

Number of hydrogen bond acceptors  23

X logP energy  1.14987

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.